Researchers at the Max Planck Institute for Chemistry have discovered that the Amazon rainforest emits previously undocumented stress-defense molecules following severe drought. During the 2023-2024 El Niño cycle, the forest released unique sesquiterpene alcohols, including beta-eudesmol, which appeared after the drought peak and persisted into the subsequent wet season, signaling a long-term metabolic shift in tropical vegetation, according to a study published in the journal Communications Earth & Environment.
How Does the Amazon Rainforest Respond to Extreme Drought?
The Amazon rainforest functions as a massive chemical engine, constantly cycling volatile organic compounds into the atmosphere. While lighter compounds like isoprene follow predictable seasonal patterns, heavier molecules known as sesquiterpenes serve as distress signals. According to the study led by Dr. Joseph Byron, these sesquiterpenes rose by 122% during the 2023-2024 El Niño, the most severe drought recorded in the basin to date.
The research team utilized the Amazon Tall Tower Observatory, located 93 miles northeast of Manaus, Brazil, to capture air samples. By sampling at 75 feet above the canopy across different stages of the drought, they observed that while lighter compounds remained stable, the forest significantly altered its chemical output in response to temperatures climbing from 79°F toward 88°F and a sharp drop in humidity.
The Amazon rainforest sequesters up to 200 petagrams (Pg) of carbon annually. Changes in its chemical emissions can significantly impact the global carbon cycle and the forest’s ability to recycle terrestrial moisture.
Why Do New Stress Molecules Appear After the Rain Returns?
In a notable finding, the forest began releasing heavier, stickier sesquiterpene alcohols—specifically beta-eudesmol, alpha-eudesmol, and gamma-eudesmol—only after the drought peak, as rainfall returned in early 2024. Prior to this research, these specific compounds had never been detected in the Amazonian atmosphere.
The presence of these alcohols suggests that the trees activate a specific metabolic pathway to combat oxidative stress, which persists well beyond the initial emergency. While beta-eudesmol is recognized in human medicine for its antioxidant and anti-inflammatory properties, the study’s project leader, Jonathan Williams, notes that further research is required to confirm if trees utilize these molecules for similar cellular protection.
What Are the Long-Term Implications for the Amazon?
The persistence of these stress-defense markers indicates that the forest’s chemical recovery may be slower than previously understood. According to Jonathan Williams, as climate change increases the frequency and intensity of El Niño events, these chemical emissions could transition from an emergency response to a permanent feature of the Amazonian atmosphere.
This shift suggests that future “hypertropical” climates may fundamentally alter the air composition above the basin. Scientists can now track these specific alcohols as live markers to monitor the ongoing health and stress levels of the rainforest as it adapts to increasingly volatile environmental conditions.
When monitoring climate impacts on biodiversity, look for shifts in chemical markers rather than just physical forest cover. Volatile organic compounds often provide the earliest evidence of metabolic stress in vegetation.
Frequently Asked Questions
What are sesquiterpenes?
Sesquiterpenes are a class of heavy, rare volatile organic compounds that trees release as a protective mechanism when facing stressors like heat, drought, or pest infestation.

Why did the forest release new molecules after the drought?
The study suggests these molecules, such as beta-eudesmol, are part of a stress-triggered metabolic pathway that remains active even after the initial drought conditions have eased, functioning as a form of oxidative stress defense.
How were these compounds measured?
Researchers used an automatic sampler at the Amazon Tall Tower Observatory to capture air hourly, which was then analyzed in a laboratory to identify the chemical composition molecule by molecule.
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