Ancient DNA recovered from frozen Arctic ground squirrel feces in Canada’s Yukon territory provides a record of extinct species, including woolly mammoths, dating back 700,000 years. According to a study published in Nature Communications by researchers at McMaster University, these permafrost-preserved burrows act as “natural archives,” offering a more diverse genetic snapshot of ancient ecosystems than fossilized bones alone.
How do squirrel burrows preserve ancient DNA?
Arctic ground squirrels serve as unintentional archivists because of their unique hibernation habits. According to lead researcher Tyler Murchie, these rodents spend roughly eight months of the year hibernating, meaning they must consume vast amounts of local vegetation and organic matter during their short four-month active period. As they pack their burrows with seeds, nuts, bones, and fur, rising permafrost in the Yukon has historically sealed these chambers. This process creates a stable, frozen environment that prevents the rapid degradation of genetic material, allowing scientists to extract DNA from samples ranging from 3,000 to 700,000 years old.
Arctic ground squirrels are not just neighbors to the animals they leave traces of; their habit of collecting “anything they can find” essentially created a biological time capsule that scientists are only now beginning to fully utilize.
What does this discovery mean for de-extinction efforts?
The discovery of mitochondrial genomes from six woolly mammoths has renewed discussions regarding the potential to “de-extinct” the species. While the U.S.-based company Colossal has publicly stated its goal to resurrect the mammoth, the scientific community remains divided on the feasibility of this project. Murchie notes that while the data retrieved from squirrel feces will be made publicly available for researchers, large-scale genomic projects already have access to vast amounts of existing ancient DNA. Skeptics, including various paleontologists, argue that any resulting animal would likely be an Asian elephant with specific genetic modifications rather than a true biological recreation of a mammoth.
Why is fecal DNA a breakthrough for paleogenomics?
Traditional paleontology relies heavily on finding large, intact skeletons, such as mammoth tusks. However, the McMaster University team found that feces offers a higher density of biodiversity. By analyzing these samples, researchers identified genetic material from wolves, bison, horses, and a cheetah, alongside hundreds of plant species. This method allows scientists to reconstruct entire ancient environments rather than focusing on a single organism. Murchie stated that the team initially intended to study only the squirrel’s microbiome, but the “really surprising biodiversity” found within the latrines suggests that biological waste is a significantly overlooked source for historical climate and evolutionary research.
Comparison: Fecal DNA vs. Fossilized Remains
| Feature | Fossilized Bones | Fecal/Burrow DNA |
|---|---|---|
| Availability | Rare, often fragmented | Abundant, found in “latrines” |
| Scope | Single species focus | Multi-species ecosystem data |
| Preservation | Requires specific conditions | High in permafrost-sealed burrows |
Frequently Asked Questions
How old is the DNA found in the Yukon burrows?
The genetic material extracted from the samples ranges between 3,000 and 700,000 years old, according to the McMaster University research team.

Is this the same DNA used by companies trying to bring back the mammoth?
The researchers are making their data public, and while it could be used by companies like Colossal, Murchie emphasized that there is already an abundance of existing mammoth genomic data available for such projects.
Why are squirrel burrows better than other sites?
Because the squirrels pack their burrows with a wide variety of local biological matter, they provide a concentrated, multi-species record that is often better preserved in permafrost than scattered remains on the surface.
If you are interested in the evolution of Arctic wildlife, keep an eye on the Nature Communications journal. The research team is currently preparing a follow-up study specifically on the evolutionary trajectory of the woolly mammoth based on these findings.
What are your thoughts on using genetic material from ancient waste to study extinction? Share your comments below or subscribe to our newsletter for the latest updates on paleogenomics.
