Embryonic reproductive cells reveal striking genomic architecture before development

by Chief Editor

The Genome’s Hidden Dance: New Insights into the Origins of Life

Researchers have discovered a remarkable reshaping of genetic material in the embryonic precursors to sperm and egg cells. This previously unknown process, detailed in a recent study published in Nature Structural & Molecular Biology, could hold the key to overcoming major hurdles in infertility treatment and the development of artificial gametes.

Epigenetic Reprogramming: A Cellular Reset

Our DNA isn’t just a static blueprint; it’s adorned with chemical marks – epigenetic tags – that dictate how genes are used in different tissues. However, germ cells, the specialized cells that become sperm and eggs, require a complete reset of these instructions. This ‘epigenetic reprogramming’ wipes the slate clean, preparing the genome for a fresh start in future generations. This involves both wiping and rebuilding chemical marks on DNA and reorganizing how DNA is packaged.

Unveiling the 3D Genome Architecture

Scientists have long understood which genes switch on and off during this transition, but the how – the physical rearrangement of the genome in three dimensions – remained a mystery. Researchers at the MRC Laboratory of Medical Sciences (LMS) and Imperial College London have now revealed that, as these cells prepare for meiosis (the cell division that creates sperm and eggs), chromosomes undergo a dramatic structural shift.

Specifically, the constricted region of each chromosome, known as the centromere, moves to the edge of the cell nucleus. This phenomenon was observed in both mouse germ cells and, strikingly, in early human embryos at 14 weeks post-conception. Using a technique called Hi-C analysis, the team similarly found that the overall organization of the genome becomes less structured, with chromosomes becoming more separated.

“This is the first time anyone has seen this change in chromosome conformation at this crucial developmental stage, right before meiosis begins,” explains Dr. Tien-Chi Huang, a postdoctoral researcher at the LMS.

The Implications for In Vitro Gametogenesis

Creating sperm and eggs in the laboratory – a process called in vitro gametogenesis – is a major goal in reproductive medicine. Scientists currently use primordial germ cell–like cells (PGCLCs), derived from embryonic stem cells, to mimic the earliest reproductive cells. However, these lab-grown cells often struggle to complete meiosis, hindering the creation of functional gametes.

The research team discovered that while embryonic germ cells naturally exhibit the centromere migration to the nucleus periphery, lab-generated PGCLCs do not. This suggests that this structural change is essential for proper meiotic progression and may explain why recreating gamete development outside the body is so challenging.

“The presence of this chromosome conformation in embryonic germ cells, but not lab-grown cells, suggests that this structural change could be required for meiosis to proceed properly and could explain why meiosis is so difficult to recreate outside the body,” says Dr. Tien-Chi Huang.

Future Trends and the Path Forward

This discovery opens up exciting new avenues for research. Future studies will focus on fully characterizing this genome restructuring process and understanding the precise mechanisms that drive it. Researchers will also investigate how to replicate this process in PGCLCs, potentially unlocking the ability to create functional sperm and eggs in the lab.

Beyond infertility treatment, this research could have broader implications for understanding the fundamental principles of genome organization and its role in development and disease. The findings also highlight the importance of considering three-dimensional genome architecture when studying epigenetic reprogramming.

Professor Petra Hajkova, Head of the Reprogramming and Chromatin group at the LMS, emphasizes the significance of the findings: “Our study has uncovered a previously unknown and frankly very surprising restructuring of genome architecture that occurs in developing germ cells, which we believe is critical for a successful execution of meiosis.”

FAQ

Q: What is epigenetic reprogramming?
A: It’s the process of erasing and rebuilding chemical marks on DNA in germ cells, preparing them for development in future generations.

Q: What is meiosis?
A: It’s a type of cell division that produces sperm and eggs, halving the genetic material to ensure the correct number of chromosomes in the fertilized egg.

Q: Why is in vitro gametogenesis important?
A: It could offer new treatments for infertility and potentially allow individuals to have children even if they are unable to produce their own gametes.

Q: What is Hi-C analysis?
A: A technique used to map the three-dimensional organization of DNA within the nucleus.

Did you know? The centromere migration to the nucleus periphery occurs around 14.5 days after fertilization in mice and at 14 weeks post-conception in humans.

Pro Tip: Understanding the 3D structure of the genome is becoming increasingly important in understanding gene regulation and development.

This research was funded by the Medical Research Council, the European Research Council, the Academy of Medical Sciences and the Department of Business, Energy and Industrial Strategy.

Explore further: Learn more about epigenetic reprogramming at Nature Scitable.

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